This is the hardest topic for me. I'm obsessed with zelda music. I know a lot on the piano, all of my ringtones are zelda music, and I have like 50 zelda songs on my mp3. Obsessed. I do have some favorites though.
I'm not smart enough to know how to post videos so I"ll just write out my top 10-ish in no particular order.
Stone Tower Temple - MM
Astral Observatory - MM
Title Theme - MM
Title Theme - OoT
Forest Temple - OoT
Song of Storms - Oot
Minish Village - MC
Sanctuary - alttp
Sacred Grove - TP - It's like a lullaby to me. It always puts me to sleep.
Dark Hyrule Castle - MC
~If you fuse all the kinstones maybe the the moon will stop falling~
Wind Waker had excellent overworld music, that changed over the day. When I heard the flute prelude of dawn I said "Finally," and it was day. As far as dungeon music, most of the games around SNES - GBA have similar Hyrule Castle/Ganon's Tower music that I find epic!
Ocarina of Time has awesome boss fight music, specifically Volvagia.
So basically WW, LttP, MC, and OoT I think have the best scores.
The Wind Waker's miniboss theme is my all time favourite. It really gives off the feel of an epic battle, rather than a one on one with some creature deep in some dark cavernous dungeon or abandoned temple. All of TWW just seemed really alive to me compared to the rest of the games (I know MM has bustling Clock Town, but the four edges of the world are desolate and full of despair until you fix the problems there)
In no particular order
Wind Waker Hyrule Castle theme
Majora's Mask Song of Healing
Ocarina of Time Song of Storms
Twilight Princess Midna's Desperate Hour
And last but definitely not least...
A Link to The Past...
---------- Post added at 08:04 PM ---------- Previous post was at 08:03 PM ----------
Oh, and I can't believe I forgot the Gerudo Valley theme from Ocarina of Time
In my opinion, THIS is the Lost Woods theme, not the one from Ocarina of Time/Majora's Mask (that was Saria's theme). This is the best theme EVER, next to the Dark World XD LOL I always remember that little bastard that would run around and steal your crap (especially cause' I always went there when I was like 4 and I couldn't figure out how to stop him from doing it) D:< I HATED HIM. But now that I'm older and know how to defend myself, I can kick his butt XDD
I made these, but it was back when I didn't have my own sound font so they aren't nearly as good as they could be, but they're better than most remixes crappy remixes <_<
The Zelda series doesn't have many good music doujin circles, but then again, the Zelda series doesn't have that much great music either...