If you go by my timeline theory, then
TP Link will not run into
OoT Link. This game takes place after Ocarina of Time, but the world has no Link, Nintendo said we'd see some characters from
OoT, so,
OoT would certainly have to be alive still right? Wrong.
At this point, Link had already gone back in time, leaving the world without him, really, how is this so hard to believe? Why would Link take all the time to beat Ganon and help the people in the future if all he had to do was go back and seal Ganon in the Sacred Realm with the Master Sword, the future that would form from his actions there would be better, who cares about the other one, it will cease to be, right? Again, wrong. Link saved the future, even though in his own time it will never come to pass because the Adult Link timeline will go on, and now there is no Link. In his own timeline, or the Young Link timeline, Link goes on to Termina, then comes back to Hyrule, we have no idea where he goes next. In Adult Link's timeline, we have Twilight Princess, and this fits in perfectly with Wind Waker. Look at the Castle, nothing like
OoT's, yet, if this takes place after Majora's Mask, it should. Why doesn't it? They rebuilt it, Ganondorf destroyed it in the future. Why is the statue of Adult Link and not Young Link? Easy, WW and
TP exist in Adult Link's timeline. Why does the story say he "appeared as if from nowhere" because he did, from the past. It shows him on a horse, something Young Link never had, and finally, why would the sages from the Adult Link timeline be in the castle basement if it wasn't from the Adult Link timeline?
Zelda to me, follows this path:
OoT-Majora's Mask-A Link to the Past-Zelda 1-Zelda 2?
OoT-Twilight Princess-Wind Waker-Phantom Hourglass?
I'd put the Oracle Series after Zelda 2, but no clue on Link's Awakening or the whole Four Swords thing, including Minish Cap.
So, essentially, you won't see him because he doesn't exist in that world. That's why WW Link is "not related" to
OoT Link, he's from a new bloodline, maybe
TP Link's.