Nah, I found Master Quest pretty lame, laughable even. The 'new' puzzles merely consisted of hidden crystal switches and torches. C'mon, that isn't harder; it's a lame search for something iddy-biddy! Plus the game didn't really change much, and some of the temples were even shortened for no apparent reason (Water Temple comes to mind, although I really didn't like it in OoT either). But Master Quest is moot, because all the real effort went into Wind Waker, and although it could have evolved much better, it still evolved over Ocarina of Time.

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Follow the rules or suffer the wraith of the mods.
"It is wrong always, everywhere, and for anyone, to believe anything upon insufficient evidence." - W.K. Clifford