I have noticed that his fingernails were a bit short, and I doubt Link clips his own nails. (Maybe Saria did it for him? I mean, in the OoT comic, she pratically raised him from birth!)
Is it just me or does Mido have a beard (Or one of the fat Kokiri). I just seem to remember a patch of orange on Mido's chin...
Another thing, in the Gibido house, the girl doesn't seem to look like she's from the Middle Ages, which is where the game takes place. She appears to be wearing the modern blouse and stockings some small girls wear.
LE GASP!!!
What if that science guy from the house had actually warped himself to the 21st century and adopted a child and brought her back to this time period? This explains her weird "I want to go home...I want father and I to go home..."
Check out the MM character screen-shots and compare her with all the others. Notice how everyone else seem to fit with the Medieval era? (Well, except Mrs. Mayor who looks like she's from the 1980's)
http://www.zeldauniverse.net/content/view/140/138/
IT'S A CONSPIRACY I TELL YOU!!!! A CONSPIRACCCCYYYYYYYYYYY!!!!!!!!!